Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847145.1_cds_XP_016509927.1_22820
CDS Infomation

[gene=LOC107827342] [db_xref=GeneID:107827342] [protein=tryptophan synthase beta chain 2-like] [protein_id=XP_016509927.1] [location=join(47065..47098,48218..48551,48644..48860,49055..49592,49663..49761,49870..50126)] [gbkey=CDS]
Sequence

ATGGCACTATCCCTCCCAAGTCTGTTTGCAAAAGGTGATGCTTATGGGATTAAGTATTTT
GAGATTAAGACAAAGCCAAGTCAATTAAAGCTTTGCTTTAGCTGTAGAACAAGGGCAAAA
GCAGCTCTTAGTACTCGTTCGATTTCCATTGAAGTTCCTCGTCAGTGGTACAATCTAGTC
GCAGACCTTCCAATCAAACCTCCACCACCATTGCATCCCAAGACTTTTCAACCTATCAAG
CCTGAGGATTTGTCTCCTCTTTTCTGCAATGAGTTGATTAAGCAGGAGGCAAGCATTGAC
CAATTTATTGATATACCAGAGGAAGTTTTAGATGTGTACAGCCTTTGGCGGCCGACCCCT
CTGATTAGAGCAAAGAGGTGGGAGAAATTGCTTGATACACCTGCGCGAATATATTACAAG
TATGAAGGTGGTAGCCCAGCAGGATCACATAAGCCCAACACTGCCGTTCCTCAAGCCTGG
TACAATAAAATGGAAAATGTCAAAAATGTTGTAACGGAGACTGGGGCTGGGCAATGGGGG
AGTGCAATATCATTTGCTTGCAGCTTATTTGGTCTCAACTGTGAGGTATGGCAAGTTCGA
GCGTCTTTTGATCAGAAACCTTATCGTAAAATGATGATGCAAACTTGGGGTGCCAAGGTG
CACCCTTCTCCTTCTGACCTTACTGAGGCTGGTCGGACTATTCTACGAATGGATCCTTCA
AGTCCAGGTAGTTTAGGTATAGCTATTTCAGAAGCTGTGGAGATTGCAGCTACAAATGCT
GACACTAAGTATTGCTTAGGAAGTGTTCTCAATCATGTTTTGTTACATCAGACTGTTATT
GGTGAGGAGTGTATAAAACAGATGGATGATTTTGGAGAGACTCCAGATGTGATCATCGGT
TGCACTGGGGGTGGATCCAATTTTGCTGGACTTGCTTTCCCATTTATCCGGGAGAAGCTT
AAGGGAAAAATTAATCCTCTTATTAGAGCGGTTGAACCTGCAGCTTGCCCCTCCTTGACG
AAGGGTGTATATGCTTATGACTATGGAGACACAGCAGGCATGACTCCGTTAATGAAAATG
CATACGCTTGGTCATGACTTCATACCTGACCCCATTCATGCCGGGGGTCTCCGTTATCAT
GGCATGGCGCCGTTGATATCACACGTCTATGAATTGGGTTTCATGGAGGCAATATCAATT
CCCCAGACTGAATGCTTTAAAGGCGCTTTACAGTTTGCTAGGTCTGAGGGGTTGATACCT
GCACCAGAACCAACTCACGCAATAGCTGCCACAATCAGGGAAGCTCTACGATGTAAAGAG
ACAGGAGAATCGAAAGTTATACTCATGGCAATGTGTGGACATGGCCATTTTGATTTGTCA
TCTTATGATAAGTATTTGCAGGGTGGCCTGGTTGATTTGTCATTTTCAGAAGAGAAAATA
AAAGCCTCACTGGCCAAAATACCGCAACCACTGTTCTAA

Peptide Sequence

PEP ID

XP_016509927.1
PEP Infomation

PREDICTED: tryptophan synthase beta chain 2-like [Nicotiana tabacum]
Sequence

MALSLPSLFAKGDAYGIKYFEIKTKPSQLKLCFSCRTRAKAALSTRSISIEVPRQWYNLV
ADLPIKPPPPLHPKTFQPIKPEDLSPLFCNELIKQEASIDQFIDIPEEVLDVYSLWRPTP
LIRAKRWEKLLDTPARIYYKYEGGSPAGSHKPNTAVPQAWYNKMENVKNVVTETGAGQWG
SAISFACSLFGLNCEVWQVRASFDQKPYRKMMMQTWGAKVHPSPSDLTEAGRTILRMDPS
SPGSLGIAISEAVEIAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMDDFGETPDVIIG
CTGGGSNFAGLAFPFIREKLKGKINPLIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKM
HTLGHDFIPDPIHAGGLRYHGMAPLISHVYELGFMEAISIPQTECFKGALQFARSEGLIP
APEPTHAIAATIREALRCKETGESKVILMAMCGHGHFDLSSYDKYLQGGLVDLSFSEEKI
KASLAKIPQPLF

Transcript Sequence

Gene sequence data has not been registered.